Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015925636.1_cds_XP_016473851.1_65936
CDS Infomation

[gene=LOC107795689] [db_xref=GeneID:107795689] [protein=SPX domain-containing membrane protein At4g22990-like isoform X2] [protein_id=XP_016473851.1] [location=complement(join(29924..30162,30248..30381,30862..31052,31533..31717,32581..32882,33102..33556,34403..34507,34740..35051,35493..35510))] [gbkey=CDS]
Sequence

ATGAAGCACACTAGTAAGATTGAAAAGATTGTTTTGTTCCTGTTGGAACAACAAGGGAAA
CTGGCAAGTACGTTATCCATGCTTGGGCAAGAACATGATGTCCTGATACAGCAACAAGAT
GGTTCAAAATTATCCCAACTACAACAGTCATATGTAGAAGTAGGCAGAGAACTGCTACGA
CTTCTCGTTTTTGTTGAAATGAATGCCATTGGTGTGCGCAAGATACTGAAAAAGTTTGAC
AAGAGATGTGAGCATAAATTCACTAATTACTATGTCAAAACTCGAGCAAATCATCCTTAT
TCCCAGTTGAGACAAATATTTAAGCATCTGGGCATTTCCGCTGTAGTTGGAACCATATCC
CGCAATCTTGTGGATCTCCAAGACAACCGTGCGAGCTATATTTCAATATATGATCAGCCT
GCTCTTCCACTTCCGGACCCTATCATCGAAGCTATTAATCATGCAGTGGATAGACTAACA
AATTCAACTGATTTCCTTCACTATTTGGGAAAACACGCACTTATTTTACCACAAGAACTG
CCAACTCCTTCCAAGGATCATGCTGCCGCTGAGAGATATCACTTGATGTCACTTCTGTTG
AACTTGGCTAATGCATTCTTGTATATGGTTAACACATATATAATAGTCCCAACAGCAGAT
GACTACTCTTTGAGTCTTGGAGCTGCAGCAACTGTTTGTGGAGCTGTGATTGGATCTATG
GCTGTTGCTCAGGTGTTCTCTTCAGTATATTTTAGTGCATGGTCAAATAAATCCTACATG
AAGCCTCTTGTTTTCAGCAGCATTGTCCTTCTGATTGGGAATACCTTATATGCACTGGCG
TATGATTTCAATTCGATATACATACTTCTAATCGGACGCCTATTTTGTGGGCTTGGTTCA
GCAAGGGCAGTTAATAGGCGCTATATCAGCGATTGTGTGCCTCTGCACCTGCGAATGAAG
GCTTCCGCTGGTTTTGTAAGTGCAAGTGCACTTGGAATGGCATGTGGTCCGGCTGTTGCC
TGCTTGCTTCAAGCTAACTTTAAGTTCATGAAGATCACTTTTAACCAAGACACTTTACCA
GGATGGATAATGGCTCTTGCATGGTTTCTTTACCTATTATGCTTGTGGATTTCCTTTAGA
GAACCTCCAAAAGAGGAAATGGTGAATGTTCTGCCACAAAAAGCCAATAGCGGGCAGATT
GAAAATGGTTTAGTGCAGAATAGTATTTCCCAGCCACTTCTTTCAAGTGCAGAGGAGAAA
CAACAAGATGAAGATGAAGACCAAGATTGCGATAATAGTGAAGAATCTGCAGAGGAGATC
CAAAAACCTGTTACTTCCATTGTCTCTGCGTATAAGCTGCTTACCCCCTCAGTGAAGGTT
CAACTGCTCATATACTTTATGCTGAAGTATGCAATGGAGATTTTACTTGCTGAATCAAGC
GTTGTCACCACGTACTACTTCATATGGTCAACAAGCAATGTGGCCATTTTTCTTGCATGT
CTTGGGCTGACTGTCCTTCCAGTTAACATTCTTGTTGGAAGCTATCTCAGCAACATGTTT
GAGGAAAGGCAAGTCTTGCTAGCATCAGAAATCTTGGTATGCTTGGGAATAGTACTGAGT
TTCCAAGTCATAATCCCTTATTCTGTACCACAATATGTCTTTTCAGCTCTTATCACATTT
GTAGCTGCTGAAGTACTCGAAGGTGTTAACCTTAACCTTCTATCTCGAGTCATGTCTTCG
AGGCTTTCTAAAGGAACGTATAATGGTGGACTACTTTCAACAGAAGCTGGAACCTTAGCT
CGAGTATTTGCAGATAGCACAATAACCTTGGCAGGATACTGGGGAATGAGTAGGCTTTTG
AATGTGACACTGCTACCTTCGCTATTTATCTGCATCTTCTCCATCATAGCCACCTGCTTC
ACTTACAATTCTCTCTATTGA

Peptide Sequence

PEP ID

XP_016473851.1
PEP Infomation

PREDICTED: SPX domain-containing membrane protein At4g22990-like isoform X2 [Nicotiana tabacum]
Sequence

MKHTSKIEKIVLFLLEQQGKLASTLSMLGQEHDVLIQQQDGSKLSQLQQSYVEVGRELLR
LLVFVEMNAIGVRKILKKFDKRCEHKFTNYYVKTRANHPYSQLRQIFKHLGISAVVGTIS
RNLVDLQDNRASYISIYDQPALPLPDPIIEAINHAVDRLTNSTDFLHYLGKHALILPQEL
PTPSKDHAAAERYHLMSLLLNLANAFLYMVNTYIIVPTADDYSLSLGAAATVCGAVIGSM
AVAQVFSSVYFSAWSNKSYMKPLVFSSIVLLIGNTLYALAYDFNSIYILLIGRLFCGLGS
ARAVNRRYISDCVPLHLRMKASAGFVSASALGMACGPAVACLLQANFKFMKITFNQDTLP
GWIMALAWFLYLLCLWISFREPPKEEMVNVLPQKANSGQIENGLVQNSISQPLLSSAEEK
QQDEDEDQDCDNSEESAEEIQKPVTSIVSAYKLLTPSVKVQLLIYFMLKYAMEILLAESS
VVTTYYFIWSTSNVAIFLACLGLTVLPVNILVGSYLSNMFEERQVLLASEILVCLGIVLS
FQVIIPYSVPQYVFSALITFVAAEVLEGVNLNLLSRVMSSRLSKGTYNGGLLSTEAGTLA
RVFADSTITLAGYWGMSRLLNVTLLPSLFICIFSIIATCFTYNSLY

Transcript Sequence

Gene sequence data has not been registered.